Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6025

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6024: 14392 - Hypothetical Protein, at 1472719 to 1473425 14392 mRNA_6025: 14393 - KOG0324 Uncharacterized conserved protein, at 1473637 to 1475874 14393 mRNA_6026: 14394 - HMMPfam-Zeta toxin-PF06414,SUPERFAMILY--SSF52540, at 1476488 to 1478196 14394

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,472,732 + -0.2
1,472,800 - 14392 mRNA_6024 0.11 -0.2
1,472,819 + 14392 mRNA_6024 0.14 -0.5
1,472,926 + 14392 mRNA_6024 0.29 -2.6
1,472,946 + 14392 mRNA_6024 0.32 -3.5
1,472,951 + 14392 mRNA_6024 0.33 -1.6
1,472,967 + 14392 mRNA_6024 0.35 -0.0
1,473,454 + -0.9
1,473,467 + -0.2
1,473,849 + -0.5
1,474,101 + 14393 mRNA_6025 0.21 -2.7
1,474,249 - 14393 mRNA_6025 0.27 -1.4
1,474,511 + 14393 mRNA_6025 0.39 -3.4
1,474,522 - 14393 mRNA_6025 0.40 -0.6
1,474,697 - 14393 mRNA_6025 0.47 -1.5
1,475,168 + 14393 mRNA_6025 0.68 -0.4
1,475,273 + 14393 mRNA_6025 0.73 -0.7
1,475,465 - 14393 mRNA_6025 0.82 -1.5
1,475,511 + 14393 mRNA_6025 0.84 -3.1
1,475,529 - 14393 mRNA_6025 0.85 -2.4
1,475,580 - 14393 mRNA_6025 0.87 -0.7
1,475,603 + 14393 mRNA_6025 0.88 -0.4
1,475,805 + -0.5
1,475,807 - -1.3
1,475,807 - -1.0
1,475,832 - 0.3
1,475,834 + -2.5
1,475,942 + -5.4
1,475,993 + -1.3
1,475,994 + 1.2
1,475,996 + -2.9
1,476,010 - -2.2
1,476,012 + -1.2
1,476,053 - -3.9
1,476,146 - -3.8
1,476,147 + -1.4
1,476,153 - -1.1
1,476,154 - -0.9
1,476,163 + -2.2
1,476,168 + -2.4
1,476,274 - -0.3
1,476,297 - -0.6
1,476,488 - -0.8