Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6007

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6006: 14374 - Hypothetical Protein, at 1437815 to 1438982 14374 mRNA_6007: 14375 - Hypothetical Protein, at 1439226 to 1440523 14375 mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1440694 to 1441642 14376

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,438,284 - 14374 mRNA_6006 0.40 -1.4
1,438,351 + 14374 mRNA_6006 0.46 -2.3
1,438,408 + 14374 mRNA_6006 0.51 -1.1
1,438,760 - 14374 mRNA_6006 0.81 0.3
1,438,764 - 14374 mRNA_6006 0.81 -2.5
1,438,881 - -0.4
1,438,907 + 0.4
1,438,928 - 0.1
1,439,011 - 0.6
1,439,063 - -3.8
1,439,211 + -3.8
1,439,235 + -0.1
1,439,259 - -1.0
1,439,478 - 14375 mRNA_6007 0.19 -0.7
1,439,481 - 14375 mRNA_6007 0.20 1.4
1,439,728 - 14375 mRNA_6007 0.39 -2.3
1,440,588 - 0.9
1,440,678 + -1.1
1,440,764 + -0.2
1,441,059 - 14376 mRNA_6008 0.38 -0.8
1,441,065 - 14376 mRNA_6008 0.39 -1.1
1,441,182 + 14376 mRNA_6008 0.51 -0.5
1,441,319 - 14376 mRNA_6008 0.66 -1.8