Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6001

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6000: 14368 - KOG2517 Ribulose kinase and related carbohydrate kinases, at 1423087 to 1425937 14368 mRNA_6001: 14369 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1426118 to 1427755 14369 mRNA_6002: 14370 - KOG4178 Soluble epoxide hydrolase, at 1428080 to 1429229 14370

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,425,327 - 14368 mRNA_6000 0.79 -2.1
1,425,341 - 14368 mRNA_6000 0.79 -1.1
1,425,342 + 14368 mRNA_6000 0.79 0.1
1,425,356 + 14368 mRNA_6000 0.80 0.5
1,425,499 - 14368 mRNA_6000 0.85 -4.3
1,425,535 + 14368 mRNA_6000 0.86 0.8
1,425,615 - 14368 mRNA_6000 0.89 -1.9
1,425,683 - -1.8
1,425,825 + 1.5
1,425,841 + -0.7
1,425,909 + 1.0
1,425,922 - -1.7
1,426,307 - 14369 mRNA_6001 0.12 -2.7
1,426,499 - 14369 mRNA_6001 0.23 0.5
1,426,510 + 14369 mRNA_6001 0.24 0.1
1,426,514 - 14369 mRNA_6001 0.24 0.1
1,426,527 + 14369 mRNA_6001 0.25 -1.5
1,426,692 + 14369 mRNA_6001 0.35 -1.1
1,426,778 - 14369 mRNA_6001 0.40 -1.5
1,427,114 - 14369 mRNA_6001 0.61 0.5
1,427,329 + 14369 mRNA_6001 0.74 -1.6
1,427,395 + 14369 mRNA_6001 0.78 -2.8
1,427,419 - 14369 mRNA_6001 0.79 -1.2
1,427,502 - 14369 mRNA_6001 0.84 -1.1
1,427,520 + 14369 mRNA_6001 0.86 -0.7
1,427,556 + 14369 mRNA_6001 0.88 -2.1
1,427,632 - -2.6
1,427,685 - -2.5
1,427,686 - 0.1
1,427,687 - -1.3
1,427,691 - -3.9
1,427,694 + -1.5
1,427,783 - -1.9
1,427,832 + -2.7
1,427,854 + -0.9
1,427,970 - -3.3
1,427,974 - -1.2
1,427,979 + -0.7
1,428,125 - 0.3
1,428,128 + -2.5
1,428,132 + -2.2
1,428,294 + 14370 mRNA_6002 0.19 -2.0
1,428,447 + 14370 mRNA_6002 0.32 -1.6
1,428,576 + 14370 mRNA_6002 0.43 -0.6
1,428,716 - 14370 mRNA_6002 0.55 -2.7