Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5998

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5997: 14365 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1412411 to 1414490 14365 mRNA_5998: 14366 - Hypothetical Protein, at 1414983 to 1417635 14366 mRNA_5999: 14367 - KOG1064 RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily, at 1417778 to 1422818 14367

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,414,205 - 14365 mRNA_5997 0.86 -1.1
1,414,219 - 14365 mRNA_5997 0.87 -0.9
1,414,278 + 14365 mRNA_5997 0.90 -0.9
1,414,519 - -0.2
1,414,803 - -0.3
1,414,854 + 0.5
1,414,862 - -0.3
1,414,969 - -4.0
1,415,241 - -3.1
1,415,285 - 14366 mRNA_5998 0.11 -0.6
1,415,334 + 14366 mRNA_5998 0.13 -1.4
1,415,355 - 14366 mRNA_5998 0.14 -0.6
1,415,450 + 14366 mRNA_5998 0.18 -3.6
1,415,536 + 14366 mRNA_5998 0.21 -0.8
1,415,645 + 14366 mRNA_5998 0.25 -1.6
1,415,680 - 14366 mRNA_5998 0.26 -1.1
1,415,714 + 14366 mRNA_5998 0.28 -2.1
1,415,728 - 14366 mRNA_5998 0.28 -0.7
1,415,758 + 14366 mRNA_5998 0.29 -1.9
1,415,944 + 14366 mRNA_5998 0.36 -0.1
1,415,993 - 14366 mRNA_5998 0.38 -1.6
1,416,164 + 14366 mRNA_5998 0.45 -1.0
1,416,296 - 14366 mRNA_5998 0.49 -1.5
1,416,426 + 14366 mRNA_5998 0.54 -3.7
1,416,749 + 14366 mRNA_5998 0.67 -2.8
1,417,182 + 14366 mRNA_5998 0.83 -0.3
1,417,298 + 14366 mRNA_5998 0.87 -2.4
1,417,313 - 14366 mRNA_5998 0.88 -3.0
1,417,436 - 0.8
1,417,442 - -1.9
1,417,454 + -1.1
1,417,582 + -1.7
1,417,591 + -3.0
1,417,618 + -0.5
1,417,647 - -1.1
1,417,721 + -1.7
1,417,724 - 0.6
1,417,754 + -0.3