Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5988

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5987: 14355 - HMMPfam-F-box-like-PF12937, at 1385071 to 1386352 14355 mRNA_5988: 14356 - K06111 EXOC4, SEC8 exocyst complex component 4, at 1386489 to 1391232 14356

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,385,518 - 14355 mRNA_5987 0.35 -2.9
1,385,568 + 14355 mRNA_5987 0.39 -1.9
1,385,580 - 14355 mRNA_5987 0.40 -0.9
1,385,622 + 14355 mRNA_5987 0.43 1.5
1,385,640 - 14355 mRNA_5987 0.44 0.4
1,385,718 + 14355 mRNA_5987 0.50 -1.6
1,385,761 + 14355 mRNA_5987 0.54 -2.2
1,385,766 + 14355 mRNA_5987 0.54 -1.5
1,385,810 + 14355 mRNA_5987 0.58 1.1
1,385,907 + 14355 mRNA_5987 0.65 -0.0
1,385,910 - 14355 mRNA_5987 0.65 -1.1
1,386,060 - 14355 mRNA_5987 0.77 -0.9
1,386,077 + 14355 mRNA_5987 0.78 1.1
1,386,089 - 14355 mRNA_5987 0.79 -2.7
1,386,095 - 14355 mRNA_5987 0.80 1.0
1,386,103 - 14355 mRNA_5987 0.80 -0.7
1,386,202 + 14355 mRNA_5987 0.88 -0.6
1,386,314 + -3.3
1,386,563 - -2.5
1,386,630 - -0.8
1,386,730 + -2.9
1,386,747 + -1.0
1,386,783 - -2.1
1,386,930 + -1.1
1,386,980 - 14356 mRNA_5988 0.10 -1.4
1,387,021 + 14356 mRNA_5988 0.11 -2.3
1,387,107 + 14356 mRNA_5988 0.13 -4.2
1,387,213 - 14356 mRNA_5988 0.15 -2.1
1,387,231 + 14356 mRNA_5988 0.16 -2.4
1,387,238 + 14356 mRNA_5988 0.16 -3.2
1,387,774 + 14356 mRNA_5988 0.27 -1.0
1,387,842 + 14356 mRNA_5988 0.29 0.1
1,387,844 + 14356 mRNA_5988 0.29 0.1
1,387,845 - 14356 mRNA_5988 0.29 -2.5
1,387,855 - 14356 mRNA_5988 0.29 -1.2
1,387,991 + 14356 mRNA_5988 0.32 -2.6
1,387,992 - 14356 mRNA_5988 0.32 -2.8
1,388,065 + 14356 mRNA_5988 0.33 -3.4
1,388,167 - 14356 mRNA_5988 0.35 -2.2
1,388,366 + 14356 mRNA_5988 0.40 1.0
1,388,526 + 14356 mRNA_5988 0.43 -3.3
1,388,600 + 14356 mRNA_5988 0.44 -3.1
1,388,672 - 14356 mRNA_5988 0.46 1.3
1,388,680 - 14356 mRNA_5988 0.46 -3.3
1,388,988 - 14356 mRNA_5988 0.53 -1.6
1,391,232 - -0.4
1,391,400 - 0.9
1,391,680 - -0.6
1,392,122 + 0.8
1,392,145 + -1.7