Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5938

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5937: 14305 - Hypothetical Protein, at 1276675 to 1277757 14305 mRNA_5938: 14306 - Hypothetical Protein, at 1278732 to 1279189 14306 mRNA_5939: 14307 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1279291 to 1281884 14307

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,277,998 + 0.2
1,278,070 + -3.0
1,278,073 - -1.5
1,278,074 + -0.5
1,278,102 - -2.1
1,278,114 - -1.9
1,278,143 + -1.0
1,278,254 - -1.5
1,278,430 - -2.2
1,278,434 - -0.5
1,278,487 + -3.0
1,278,537 - -1.2
1,278,553 + 0.1
1,278,554 + -1.4
1,278,612 + 1.3
1,278,665 + -1.2
1,278,692 - -1.3
1,278,718 + -3.4
1,278,724 + -2.6
1,278,829 - 14306 mRNA_5938 0.21 0.1
1,278,842 + 14306 mRNA_5938 0.24 -2.2
1,278,906 + 14306 mRNA_5938 0.38 -0.4
1,278,906 - 14306 mRNA_5938 0.38 -1.8
1,279,002 + 14306 mRNA_5938 0.59 -3.1
1,279,161 + -1.9
1,279,321 + -0.7
1,279,503 + -0.6
1,279,695 + 14307 mRNA_5939 0.16 0.2
1,280,021 + 14307 mRNA_5939 0.28 -4.2