Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5931

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5930: 14298 - Hypothetical Protein, at 1261131 to 1261763 14298 mRNA_5931: 14299 - SUPERFAMILY--SSF51695, at 1261910 to 1263239 14299 mRNA_5932: 14300 - Hypothetical Protein, at 1264091 to 1265765 14300

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,261,051 - -3.3
1,261,573 - 14298 mRNA_5930 0.70 -1.6
1,261,670 - 14298 mRNA_5930 0.85 -3.7
1,261,802 - -1.3
1,261,878 + -0.7
1,261,982 - -2.5
1,261,986 + -2.9
1,262,175 + 14299 mRNA_5931 0.20 -1.1
1,262,301 - 14299 mRNA_5931 0.29 0.1
1,262,302 + 14299 mRNA_5931 0.29 -0.9
1,262,714 - 14299 mRNA_5931 0.60 -2.1
1,262,967 + 14299 mRNA_5931 0.79 -0.6
1,262,978 + 14299 mRNA_5931 0.80 0.1
1,263,268 - -0.1
1,263,268 - 0.6
1,263,382 - -3.2
1,263,421 - 0.1
1,263,432 + -2.1
1,263,439 - -2.1
1,263,440 + -0.3
1,263,441 - -0.0
1,263,449 - 0.1
1,263,451 + 0.4
1,263,453 - -0.8
1,263,461 + -1.0
1,263,464 + 0.0
1,263,474 + 0.6
1,263,484 + -2.0
1,263,486 + -3.1
1,263,490 + -1.3
1,263,500 - 0.1
1,263,506 + -3.1
1,263,507 + -1.4
1,263,510 + -1.2
1,263,513 - -0.2
1,263,555 - -1.5
1,263,570 - 0.3
1,263,577 + -2.9
1,263,580 + 1.1
1,263,588 + -2.3
1,263,590 + -3.8
1,263,602 + -3.5
1,263,618 - -1.9
1,263,623 - -1.5
1,263,705 - -0.6
1,263,728 + -2.0
1,263,756 + -3.0
1,263,781 + -1.7
1,263,829 + -1.6
1,263,835 + -1.1
1,263,891 - -0.6
1,264,008 + -1.2
1,264,049 + -2.6