Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5928

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5927: 14295 - K02979 RP-S28e, RPS28 small subunit ribosomal protein S28e, at 1256720 to 1257399 14295 mRNA_5928: 14296 - KOG3472 Predicted small membrane protein, at 1258045 to 1258837 14296 mRNA_5929: 14297 - Hypothetical Protein, at 1259104 to 1259543 14297

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,257,695 - -1.7
1,257,728 - 0.8
1,257,851 - 2.1
1,258,001 - 0.1
1,258,278 + 14296 mRNA_5928 0.29 -2.6
1,258,282 - 14296 mRNA_5928 0.30 -2.8
1,258,455 - 14296 mRNA_5928 0.52 -1.4
1,258,557 + 14296 mRNA_5928 0.65 -1.5
1,258,664 - 14296 mRNA_5928 0.78 -3.0
1,259,001 - -2.2
1,259,023 + 0.6
1,259,180 + 14297 mRNA_5929 0.17 -0.4
1,259,302 - 14297 mRNA_5929 0.45 -2.0
1,259,308 - 14297 mRNA_5929 0.46 -1.8
1,259,449 - 14297 mRNA_5929 0.78 -2.9
1,259,456 - 14297 mRNA_5929 0.80 -1.2
1,259,508 - -2.9
1,259,602 - -1.5
1,259,756 + -1.0