Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5923

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5922: 14290 - KOG2615 Permease of the major facilitator superfamily, at 1248033 to 1250292 14290 mRNA_5923: 14291 - Hypothetical Protein, at 1250521 to 1252359 14291 mRNA_5924: 14292 - Hypothetical Protein, at 1252767 to 1253649 14292

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,249,601 - 14290 mRNA_5922 0.69 -2.6
1,249,606 + 14290 mRNA_5922 0.70 -2.4
1,249,610 - 14290 mRNA_5922 0.70 -3.2
1,249,966 - 14290 mRNA_5922 0.86 -1.2
1,250,077 - -1.7
1,250,164 + -0.8
1,250,245 - 0.5
1,250,398 + -0.8
1,250,825 + 14291 mRNA_5923 0.17 -0.8
1,250,956 + 14291 mRNA_5923 0.24 -0.7
1,251,114 - 14291 mRNA_5923 0.32 -1.7
1,251,226 - 14291 mRNA_5923 0.38 -2.8
1,251,540 + 14291 mRNA_5923 0.55 -0.6
1,251,541 - 14291 mRNA_5923 0.55 -0.9
1,251,605 + 14291 mRNA_5923 0.59 -1.5
1,251,690 - 14291 mRNA_5923 0.64 -2.3
1,251,704 + 14291 mRNA_5923 0.64 1.1
1,251,707 - 14291 mRNA_5923 0.64 -2.2
1,251,955 - 14291 mRNA_5923 0.78 -0.3
1,251,986 - 14291 mRNA_5923 0.80 -2.8
1,251,992 + 14291 mRNA_5923 0.80 -3.4
1,252,007 + 14291 mRNA_5923 0.81 -1.0
1,252,123 - 14291 mRNA_5923 0.87 -1.4
1,252,128 + 14291 mRNA_5923 0.87 -0.5
1,252,131 - 14291 mRNA_5923 0.88 0.1
1,252,132 + 14291 mRNA_5923 0.88 1.1
1,252,138 + 14291 mRNA_5923 0.88 -0.7
1,252,139 - 14291 mRNA_5923 0.88 -0.9
1,252,143 - 14291 mRNA_5923 0.88 0.4
1,252,194 - 0.3
1,252,221 + -3.4
1,252,358 + -1.6
1,252,770 - 0.8