Experiments: 40 hrs No Buoyancy Separation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
500 nt
mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1207827 to 1210876 14271 mRNA_5904: 14272 - KOG4234 TPR repeat-containing protein, at 1211111 to 1212389 14272 mRNA_5905: 14273 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 1212592 to 1214577 14273
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Per-strain Table Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation remove 1,210,133 + 14271 mRNA_5903 0.76 -0.9 1,210,167 - 14271 mRNA_5903 0.77 -0.8 1,210,203 - 14271 mRNA_5903 0.78 -1.1 1,210,219 - 14271 mRNA_5903 0.78 -1.2 1,210,241 - 14271 mRNA_5903 0.79 -4.0 1,210,297 + 14271 mRNA_5903 0.81 2.3 1,210,304 - 14271 mRNA_5903 0.81 -2.4 1,210,322 + 14271 mRNA_5903 0.82 -0.4 1,210,350 - 14271 mRNA_5903 0.83 2.0 1,210,358 - 14271 mRNA_5903 0.83 -1.5 1,210,380 + 14271 mRNA_5903 0.84 0.1 1,210,389 + 14271 mRNA_5903 0.84 -0.7 1,210,389 + 14271 mRNA_5903 0.84 -0.6 1,210,395 + 14271 mRNA_5903 0.84 -2.8 1,210,396 - 14271 mRNA_5903 0.84 -1.3 1,210,399 - 14271 mRNA_5903 0.84 -2.2 1,210,406 - 14271 mRNA_5903 0.85 -0.8 1,210,408 + 14271 mRNA_5903 0.85 -0.8 1,210,416 - 14271 mRNA_5903 0.85 0.2 1,210,435 + 14271 mRNA_5903 0.86 -3.5 1,210,442 - 14271 mRNA_5903 0.86 0.8 1,210,442 - 14271 mRNA_5903 0.86 -2.5 1,210,446 + 14271 mRNA_5903 0.86 -0.4 1,210,447 - 14271 mRNA_5903 0.86 -2.3 1,210,448 + 14271 mRNA_5903 0.86 -2.0 1,210,450 - 14271 mRNA_5903 0.86 -2.7 1,210,457 - 14271 mRNA_5903 0.86 -1.3 1,210,457 - 14271 mRNA_5903 0.86 -1.1 1,210,458 + 14271 mRNA_5903 0.86 -1.8 1,210,459 + 14271 mRNA_5903 0.86 -0.5 1,210,460 + 14271 mRNA_5903 0.86 -1.0 1,210,460 + 14271 mRNA_5903 0.86 -1.9 1,210,462 - 14271 mRNA_5903 0.86 -1.2 1,210,464 - 14271 mRNA_5903 0.86 -1.2 1,210,470 + 14271 mRNA_5903 0.87 0.3 1,210,472 - 14271 mRNA_5903 0.87 -1.2 1,210,478 - 14271 mRNA_5903 0.87 -2.3 1,210,499 + 14271 mRNA_5903 0.88 -1.2 1,210,500 - 14271 mRNA_5903 0.88 0.2 1,210,509 + 14271 mRNA_5903 0.88 -0.3 1,210,511 + 14271 mRNA_5903 0.88 -2.0 1,210,518 - 14271 mRNA_5903 0.88 -1.7 1,210,518 - 14271 mRNA_5903 0.88 -3.0 1,210,536 + 14271 mRNA_5903 0.89 -1.6 1,210,590 - -0.2 1,210,598 + -2.5 1,210,599 + -2.5 1,210,614 - -2.9 1,210,617 + -1.8 1,210,618 + -1.5 1,210,620 - -1.5 1,210,653 - -2.5 1,210,654 - 1.3 1,210,656 - -1.1 1,210,659 + -0.4 1,210,659 - -0.2 1,210,660 - -1.5 1,210,660 - -1.7 1,210,660 - -0.7 1,210,668 - -0.5 1,210,673 - 1.6 1,210,673 + -0.8 1,210,673 + -0.3 1,210,676 + -1.6 1,210,679 - -0.9 1,210,680 + -1.1 1,210,680 + 0.1 1,210,683 - -1.4 1,210,687 - -3.0 1,210,690 - -1.7 1,210,690 - 0.1 1,210,697 - -3.6 1,210,709 + -0.2 1,210,723 + -3.1 1,210,726 - 0.0 1,210,743 - -0.9 1,210,758 + -0.2 1,210,771 + -0.5 1,210,791 - -2.5 1,210,792 - -1.1 1,210,797 + 0.0 1,210,799 + -1.2 1,210,833 - -0.1 1,210,852 - 0.5 1,210,858 + -2.9 1,210,867 + -3.9 1,210,873 - -1.2 1,210,878 - 0.2 1,210,880 - -1.0 1,210,880 - -1.5 1,210,880 - -0.8 1,210,884 - -5.1 1,210,885 + -0.3 1,210,892 + 0.3 1,210,895 + -1.5 1,210,897 + 0.4 1,210,901 - -1.7 1,210,904 + -2.5 1,210,909 + -1.3 1,210,909 - -1.0 1,210,910 - 0.8 1,210,917 + 1.5 1,210,917 - -2.4 1,210,918 + 0.2 1,210,918 + 0.0 1,210,934 + -2.8 1,210,935 + -1.1 1,210,937 - -2.6 1,210,941 + -2.0 1,210,946 + -2.1 1,210,963 + -0.6 1,211,030 - -3.3 1,211,039 + -0.7 1,211,081 + -1.1 1,211,081 + -0.6 1,211,086 + -0.8 1,211,192 + -0.2 1,211,201 + -0.3 1,211,208 + -3.0 1,211,220 - -1.8 1,211,242 + 14272 mRNA_5904 0.10 0.3 1,211,243 + 14272 mRNA_5904 0.10 -1.1 1,211,355 - 14272 mRNA_5904 0.19 -2.5 1,211,368 - 14272 mRNA_5904 0.20 -0.1 1,211,378 - 14272 mRNA_5904 0.21 -2.4 1,211,528 - 14272 mRNA_5904 0.33 -2.6 1,211,553 - 14272 mRNA_5904 0.35 -0.1 1,211,965 + 14272 mRNA_5904 0.67 -0.9 1,211,981 + 14272 mRNA_5904 0.68 0.0 1,212,276 + -0.6 1,212,292 + -0.9 1,212,385 - -0.8 1,212,405 - 1.0 1,212,549 - -1.4 1,212,577 + -1.9 1,212,673 - 0.0 1,212,815 - 14273 mRNA_5905 0.11 -0.1 1,212,836 - 14273 mRNA_5905 0.12 0.0 1,212,978 - 14273 mRNA_5905 0.19 -1.7 1,213,125 + 14273 mRNA_5905 0.27 -0.9 1,213,202 + 14273 mRNA_5905 0.31 -3.5