Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5891

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5891: 14259 - K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase, at 1182342 to 1185171 14259 mRNA_5892: 14260 - Hypothetical Protein, at 1185349 to 1185740 14260 mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1185881 to 1186514 14261

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,181,353 - -1.1
1,181,354 - -2.1
1,181,360 - -2.1
1,181,361 + 0.5
1,181,364 + -0.3
1,181,364 + -0.5
1,181,368 + -1.2
1,181,369 - -1.2
1,181,373 - -2.4
1,181,373 + -0.6
1,181,376 + -1.8
1,181,376 + -1.9
1,181,377 + 0.6
1,181,379 + -3.3
1,181,384 + -2.7
1,181,386 + -1.4
1,181,556 - -1.6
1,181,571 - -0.1
1,181,574 + -2.2
1,181,694 + -1.2
1,181,960 - -0.2
1,181,978 + -3.4
1,182,006 + 0.8
1,182,123 + -0.4
1,182,131 + -0.2
1,182,136 - -0.7
1,182,286 - -1.8
1,182,449 + 0.0
1,182,762 + 14259 mRNA_5891 0.15 2.8
1,182,769 - 14259 mRNA_5891 0.15 -1.5
1,183,774 + 14259 mRNA_5891 0.51 0.0
1,185,527 + 14260 mRNA_5892 0.45 -2.3
1,185,545 - 14260 mRNA_5892 0.50 -0.2
1,185,649 - 14260 mRNA_5892 0.77 -0.4
1,185,664 - 14260 mRNA_5892 0.80 0.6
1,185,811 - -3.0