Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5805

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5804: 14172 - Hypothetical Protein, at 978003 to 978815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979008 to 980217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980969 to 985772 14174

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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978,141 + 14172 mRNA_5804 0.17 -2.5
978,609 - 14172 mRNA_5804 0.75 -2.2
979,464 + 14173 mRNA_5805 0.38 -2.5
979,655 - 14173 mRNA_5805 0.53 1.2
979,728 + 14173 mRNA_5805 0.60 0.1
979,740 + 14173 mRNA_5805 0.60 -0.2
980,025 - 14173 mRNA_5805 0.84 -1.2
980,274 - 1.3
980,277 - -3.0
980,312 + -0.0
980,312 + -3.0
980,326 - -0.5
980,334 - -1.7
980,457 - -0.7
980,743 + -0.5
980,946 + -1.0