Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5770

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5769: 14137 - Hypothetical Protein, at 902157 to 903800 14137 mRNA_5770: 14138 - K15171 SUPT4H1, SPT4 transcription elongation factor SPT4, at 904277 to 904949 14138 mRNA_5771: 14139 - K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase, at 905200 to 913412 14139

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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903,783 - -1.7
903,802 - -0.1
903,927 + 1.0
903,949 + -1.0
903,983 + -1.3
904,098 + 0.7
904,100 - 0.0
904,209 - -0.9
904,233 + -0.6
904,253 + -2.6
904,257 - 0.1
904,825 + 14138 mRNA_5770 0.81 0.3
905,086 - 0.5
905,268 + -1.8
905,273 - 0.0
905,294 + -0.3
905,437 + -1.8
905,522 + -0.6
905,524 - -2.5
905,794 - -1.1
905,834 - -2.2