Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5764

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131 mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132 mRNA_5765: 14133 - Interpro Promethin, at 888017 to 888883 14133

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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885,501 - 14131 mRNA_5763 0.39 1.5
885,506 + 14131 mRNA_5763 0.39 -0.6
885,522 - 14131 mRNA_5763 0.40 -1.4
885,528 + 14131 mRNA_5763 0.41 -1.6
885,834 + 14131 mRNA_5763 0.64 -0.6
886,106 + 14131 mRNA_5763 0.84 -0.5
886,107 + 14131 mRNA_5763 0.84 -0.4
886,151 + 14131 mRNA_5763 0.87 -0.1
886,227 - -0.7
886,229 - -2.7
886,243 - 0.5
886,257 + -0.0
886,301 - -2.3
886,374 + -0.3
886,377 + -0.1
886,395 - -1.7
886,401 + -0.8
886,406 + -1.8
886,501 + -2.8
886,641 - 14132 mRNA_5764 0.11 -0.7
886,677 - 14132 mRNA_5764 0.14 -1.7
886,763 + 14132 mRNA_5764 0.20 -1.3
886,884 + 14132 mRNA_5764 0.29 -4.1
887,180 - 14132 mRNA_5764 0.52 -0.8
887,265 + 14132 mRNA_5764 0.59 0.6
887,292 + 14132 mRNA_5764 0.61 -3.6
887,426 - 14132 mRNA_5764 0.71 -2.1
887,476 + 14132 mRNA_5764 0.75 -0.0
887,735 + -1.3
887,751 + -0.2
887,751 - -1.5
887,862 - 0.2
887,865 - -1.3
887,868 + -2.5
887,884 + -2.2
887,890 + -3.7
887,894 - -0.5
887,895 + -2.6
887,895 + -1.3
887,901 + 1.8
887,904 - 0.8
887,923 + -0.5
888,201 + 14133 mRNA_5765 0.21 -0.5
888,513 + 14133 mRNA_5765 0.57 -1.6
888,586 + 14133 mRNA_5765 0.66 -2.1
888,611 + 14133 mRNA_5765 0.69 -0.9
888,612 - 14133 mRNA_5765 0.69 -0.8
888,628 + 14133 mRNA_5765 0.70 -1.2
888,643 + 14133 mRNA_5765 0.72 -1.4
888,733 - 14133 mRNA_5765 0.83 -1.1
888,773 - 14133 mRNA_5765 0.87 -3.0