Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5761

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5760: 14128 - K14015 NPLOC4, NPL4 nuclear protein localization protein 4 homolog, at 878316 to 881175 14128 mRNA_5761: 14129 - K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11, at 881466 to 883589 14129 mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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881,224 - -0.2
881,295 - -0.7
881,359 - 0.3
881,372 + -0.3
881,379 - -0.9
881,433 - 0.1
881,893 + 14129 mRNA_5761 0.20 -0.5
881,896 - 14129 mRNA_5761 0.20 0.4
882,061 + 14129 mRNA_5761 0.28 -0.7
882,090 - 14129 mRNA_5761 0.29 -0.4
882,655 - 14129 mRNA_5761 0.56 -0.0
882,682 + 14129 mRNA_5761 0.57 -0.2
882,817 - 14129 mRNA_5761 0.64 -2.1
883,024 + 14129 mRNA_5761 0.73 -1.3
883,126 - 14129 mRNA_5761 0.78 -2.0
883,280 - 14129 mRNA_5761 0.85 -3.6
883,283 - 14129 mRNA_5761 0.86 -0.1
883,397 - -0.7
883,460 - 0.2
883,549 - -0.4
883,550 + -2.3
883,562 + -0.4
883,566 + -1.2
883,704 - -1.4
883,706 - -0.2
883,713 - 0.2
883,730 - -3.3
883,733 - 0.8
883,735 - -2.7
883,743 + -2.5
883,745 + -2.0
883,748 + 1.5
883,748 + 0.1
883,748 - -2.2
883,753 - 0.1
883,768 + 0.8
883,835 + -2.2
883,878 - -1.7
884,054 - -0.7
884,252 + -1.6
884,298 - -2.6
884,333 + 14130 mRNA_5762 0.12 0.6
884,496 - 14130 mRNA_5762 0.41 -1.3