Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5721

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5720: 14088 - K04392 RAC1 Ras-related C3 botulinum toxin substrate 1, at 767473 to 768381 14088 mRNA_5721: 14089 - K19219 JMJD7 jumonji domain-containing protein 7, at 768732 to 770042 14089 mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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768,751 - -1.6
769,199 - 14089 mRNA_5721 0.36 -0.8
769,237 + 14089 mRNA_5721 0.39 0.0
769,397 - 14089 mRNA_5721 0.51 0.9
769,503 - 14089 mRNA_5721 0.59 -3.3
769,654 - 14089 mRNA_5721 0.70 -0.3
769,779 - 14089 mRNA_5721 0.80 -0.3
770,223 - 0.8
770,399 - -2.4
770,623 - 14090 mRNA_5722 0.10 -1.5