Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5720

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5719: 14087 - K00290 LYS1 saccharopine dehydrogenase (NAD+, L-lysine forming), at 765726 to 767088 14087 mRNA_5720: 14088 - K04392 RAC1 Ras-related C3 botulinum toxin substrate 1, at 767473 to 768381 14088 mRNA_5721: 14089 - K19219 JMJD7 jumonji domain-containing protein 7, at 768732 to 770042 14089

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
767,145 - -3.3
767,293 - -2.2
767,300 + -1.7
767,306 + -3.7
767,440 + -3.1
767,443 - -2.9
767,443 - -1.3
767,477 + -0.9
767,480 + -0.6
767,591 - 14088 mRNA_5720 0.13 -1.5
767,596 + 14088 mRNA_5720 0.14 -0.7
767,600 + 14088 mRNA_5720 0.14 -1.7
767,602 + 14088 mRNA_5720 0.14 -1.9
767,605 - 14088 mRNA_5720 0.15 -0.9
767,635 + 14088 mRNA_5720 0.18 -3.4
768,751 - -1.6
769,199 - 14089 mRNA_5721 0.36 -0.8
769,237 + 14089 mRNA_5721 0.39 0.0