Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5718

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086 mRNA_5719: 14087 - K00290 LYS1 saccharopine dehydrogenase (NAD+, L-lysine forming), at 765726 to 767088 14087

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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762,510 - 14085 mRNA_5717 0.67 0.5
762,940 - 14085 mRNA_5717 0.86 -1.4
763,063 + -1.7
763,102 + -2.8
763,234 + -0.3
763,967 + 14086 mRNA_5718 0.27 -1.0
764,248 - 14086 mRNA_5718 0.41 1.3
764,250 - 14086 mRNA_5718 0.41 -3.2
764,673 + 14086 mRNA_5718 0.62 -3.5
764,937 - 14086 mRNA_5718 0.75 -0.7
764,962 - 14086 mRNA_5718 0.76 -1.7
765,386 - 0.7
765,508 - -1.2
765,526 - -3.9
765,539 - 0.8
765,544 - -2.0
765,546 - -1.7
765,546 + -3.1
765,550 - -2.4
765,555 + -1.2
765,558 + -1.9
765,559 + -1.6
765,561 - -0.7
765,571 - -2.4
765,574 + -0.6
765,655 - -0.9
765,686 + -0.2
765,686 - -4.4
765,697 - -3.4
765,698 - -0.7
765,698 - 1.4
765,698 - 0.6
765,703 - -2.1
765,705 + -1.7
765,705 + -0.7
765,712 + -1.9
765,717 + 0.2