Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5717

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5716: 14084 - Hypothetical Protein, at 759003 to 760646 14084 mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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760,159 + 14084 mRNA_5716 0.70 -0.6
760,299 + 14084 mRNA_5716 0.79 -1.7
760,455 + 14084 mRNA_5716 0.88 -3.2
760,559 - 1.1
760,871 - -1.7
760,872 - -1.5
760,878 + -0.6
760,880 - -1.1
760,882 - 1.4
760,886 + -0.3
760,899 + -2.6
760,899 + -1.1
760,901 + -1.9
761,037 + -2.3
761,041 + -1.6
761,064 - -1.7
761,208 + 14085 mRNA_5717 0.11 -2.8
761,322 - 14085 mRNA_5717 0.16 -3.2
761,325 + 14085 mRNA_5717 0.16 -2.9
761,327 - 14085 mRNA_5717 0.16 -1.7
761,613 - 14085 mRNA_5717 0.28 0.4
761,793 + 14085 mRNA_5717 0.36 -1.8
761,936 + 14085 mRNA_5717 0.42 -1.1
762,366 - 14085 mRNA_5717 0.61 -3.0
762,510 - 14085 mRNA_5717 0.67 0.5
762,940 - 14085 mRNA_5717 0.86 -1.4
763,063 + -1.7
763,102 + -2.8
763,234 + -0.3
763,967 + 14086 mRNA_5718 0.27 -1.0
764,248 - 14086 mRNA_5718 0.41 1.3
764,250 - 14086 mRNA_5718 0.41 -3.2