Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5689

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697061 to 698504 14056 mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698626 to 699781 14057 mRNA_5690: 14058 - K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1, at 700061 to 702418 14058

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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697,669 + 14056 mRNA_5688 0.42 -1.9
698,209 + 14056 mRNA_5688 0.80 1.9
698,516 - -0.9
698,521 - -1.7
698,591 + -0.8
698,597 + 1.2
699,157 + 14057 mRNA_5689 0.46 0.1
699,880 + 0.9
699,984 + -0.0
700,025 - -1.7