Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5673

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5672: 14040 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 661581 to 662502 14040 mRNA_5673: 14041 - Hypothetical Protein, at 663280 to 665489 14041 mRNA_5674: 14042 - K14560 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3, at 666180 to 667115 14042

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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662,521 - 0.5
662,725 + -0.4
662,809 + -1.1
662,823 + -0.5
662,827 + -0.3
662,848 - -1.8
662,854 + -0.9
662,894 - -2.6
662,920 + -2.1
662,922 - -0.2
662,928 + -0.3
662,944 - -0.2
662,991 + 0.0
662,992 - 0.4
662,998 + -1.5
663,005 + -0.9
663,007 + -1.6
663,008 + -1.6
663,011 + -1.8
663,016 + 0.2
663,021 - -1.6
663,067 + -1.4
663,073 + 1.1
663,183 + 0.4
663,330 + 0.5
663,730 - 14041 mRNA_5673 0.20 0.6
664,070 + 14041 mRNA_5673 0.36 -0.2
664,217 - 14041 mRNA_5673 0.42 -0.6
664,619 + 14041 mRNA_5673 0.61 1.1
664,763 + 14041 mRNA_5673 0.67 -3.3
664,794 - 14041 mRNA_5673 0.69 -0.2
665,075 - 14041 mRNA_5673 0.81 -1.2
665,347 + -1.7
665,357 + -0.8
665,444 + 0.2
665,583 - -0.7
665,634 + -2.8
665,760 + -2.4
665,886 + -1.2
665,902 + 0.1
666,050 - -1.5
666,065 - -0.7