Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5662

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5661: 14029 - K15151 MED10, NUT2 mediator of RNA polymerase II transcription subunit 10, at 626154 to 626959 14029 mRNA_5662: 14030 - Hypothetical Protein, at 627224 to 629083 14030 mRNA_5663: 14031 - K15441 TAD2, ADAT2 tRNA-specific adenosine deaminase 2, at 629473 to 630402 14031

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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627,615 + 14030 mRNA_5662 0.21 -1.8
627,765 + 14030 mRNA_5662 0.29 -0.8
627,770 - 14030 mRNA_5662 0.29 -2.4
627,772 + 14030 mRNA_5662 0.29 -3.1
628,024 - 14030 mRNA_5662 0.43 -1.4
628,050 + 14030 mRNA_5662 0.44 0.4
628,243 - 14030 mRNA_5662 0.55 -0.2
628,274 + 14030 mRNA_5662 0.56 -1.9
628,406 + 14030 mRNA_5662 0.64 -2.2
628,529 + 14030 mRNA_5662 0.70 -1.6
628,568 + 14030 mRNA_5662 0.72 -2.2
628,674 - 14030 mRNA_5662 0.78 -1.2
628,699 - 14030 mRNA_5662 0.79 -0.0
628,849 - 14030 mRNA_5662 0.87 -2.5
628,854 + 14030 mRNA_5662 0.88 -1.5
629,131 + 1.3
629,437 + -1.2