Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5623

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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533,322 - 13990 mRNA_5622 0.69 -1.5
533,563 + 13990 mRNA_5622 0.79 -1.8
533,727 + 13990 mRNA_5622 0.86 -0.4
534,012 + -3.4
534,155 + -2.3
534,158 - -2.9
534,346 - -0.3
534,423 - 13991 mRNA_5623 0.17 -2.9
534,738 - 13991 mRNA_5623 0.53 -0.6
534,914 - 13991 mRNA_5623 0.74 -1.2
534,951 - 13991 mRNA_5623 0.78 2.3
534,987 + 13991 mRNA_5623 0.82 0.1
535,219 - 1.4
535,355 + -1.0
535,365 + -1.8
535,388 + 0.5
535,444 + -2.0
535,570 + -1.3