Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5597

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762 13964 mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822 13965 mRNA_5598: 13966 - KOG0118 FOG RRM domain, at 474328 to 475458 13966

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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472,120 - -0.0
472,134 + -0.8
472,135 + 1.3
472,155 + 0.1
472,172 + -2.7
472,187 - -0.2
472,188 + -0.9
472,309 - -0.5
472,362 - -0.4
472,367 - -1.3
472,380 + -0.0
472,381 + -3.7
472,387 + -3.6
472,389 + 0.5
472,395 + -2.8
472,395 - -1.9
472,404 + -0.7
472,405 + -3.5
472,406 - -2.1
472,416 + -2.8
472,535 - 0.7
472,572 - -0.6
472,694 - -1.0
472,833 - 13965 mRNA_5597 0.16 -3.7
472,845 + 13965 mRNA_5597 0.17 -3.0
473,242 - 13965 mRNA_5597 0.51 -2.2
473,258 + 13965 mRNA_5597 0.52 0.2
473,450 - 13965 mRNA_5597 0.68 -0.8
474,411 - -2.0