Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5589

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5589: 13957 - HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371, at 452647 to 453380 13957 mRNA_5590: 13958 - K11137 TELO2, TEL2 telomere length regulation protein, at 453497 to 457057 13958

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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451,810 + 1.7
451,819 - -1.7
451,822 - -0.0
451,976 + -0.3
451,982 - 0.7
452,008 - -2.3
452,118 - 0.0
452,157 + -1.1
452,276 - -1.4
452,276 + -3.3
452,423 - 0.2
452,540 - -1.9
452,596 - 0.4
453,000 + 13957 mRNA_5589 0.48 -0.5
453,034 + 13957 mRNA_5589 0.53 0.9