Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5571

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5570: 13938 - K06067 HDAC1_2 histone deacetylase 1/2, at 399570 to 402274 13938 mRNA_5571: 13939 - K14546 UTP5, WDR43 U3 small nucleolar RNA-associated protein 5, at 402481 to 405282 13939 mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405680 to 409565 13940

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
401,962 + 13938 mRNA_5570 0.88 0.6
401,979 + 13938 mRNA_5570 0.89 -2.7
402,095 - -0.8
402,097 - -1.6
402,100 + -2.3
402,116 + -1.5
402,240 - -1.3
402,293 + -2.3
403,864 + 13939 mRNA_5571 0.49 -2.3
405,223 + 0.2
405,246 + -1.2
405,340 + -3.6
405,357 - -0.3
405,363 + -0.5
405,368 + -3.3
405,491 + -0.3
405,505 + -1.1
405,517 + 0.9
405,520 - -1.6
405,522 + -0.7
405,526 - -2.3
405,528 + -1.2
405,666 + -0.7
405,763 - -2.9
405,784 - 0.7
405,826 - -2.2
405,838 + 0.2
405,959 + -1.7
405,961 + -0.8
406,097 - 13940 mRNA_5572 0.11 0.0
406,243 + 13940 mRNA_5572 0.14 -1.8