Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5552

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5551: 13919 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 356341 to 358990 13919 mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359863 to 362993 13920 mRNA_5553: 13921 - K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11, at 363195 to 364083 13921

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
358,902 + -2.1
358,948 + -0.8
359,030 - 0.1
359,039 - -0.9
359,049 - -0.8
359,056 - 1.5
359,069 + -0.8
359,121 - -0.8
359,207 - 1.9
359,213 - -1.9
359,223 - -0.1
359,332 - -1.9
359,459 - -1.8
359,479 + -2.1
359,609 + 0.1
359,627 + -1.5
359,627 - -1.5
359,771 + -0.8
362,355 + 13920 mRNA_5552 0.80 -2.8
362,381 + 13920 mRNA_5552 0.80 -1.2
362,774 + -0.8
362,831 - 0.1
363,094 - 0.7