Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5501

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245382 to 247759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247912 to 250557 13870

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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245,091 + 2.1
245,115 + -0.7
245,379 - -1.9
245,406 - 1.3
245,720 + 13869 mRNA_5501 0.14 -2.3
246,392 + 13869 mRNA_5501 0.42 -0.5
246,956 - 13869 mRNA_5501 0.66 1.3
246,981 - 13869 mRNA_5501 0.67 1.0
247,272 - 13869 mRNA_5501 0.79 -1.9
247,418 - 13869 mRNA_5501 0.86 -1.9
247,544 - -1.1
247,715 + -0.1
248,332 - 13870 mRNA_5502 0.16 -3.1
248,456 - 13870 mRNA_5502 0.21 -0.8
248,508 + 13870 mRNA_5502 0.23 -0.5