Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5480

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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197,634 + -3.0
197,780 - 2.2
197,909 - -1.5
197,911 + -0.7
198,057 - -0.4
198,224 - -2.8
198,358 - -1.1
198,636 + 13848 mRNA_5480 0.53 -2.0
198,651 + 13848 mRNA_5480 0.56 -1.2
198,698 - 13848 mRNA_5480 0.66 -1.4
198,782 - 13848 mRNA_5480 0.83 0.9
198,788 - 13848 mRNA_5480 0.84 -2.0
198,797 - 13848 mRNA_5480 0.86 -1.7
198,811 - 13848 mRNA_5480 0.89 -2.1
198,989 + 0.3
199,095 + -3.8
199,335 - -1.5
199,392 + -1.3
199,480 + 13849 mRNA_5481 0.11 -0.2
199,514 - 13849 mRNA_5481 0.14 -2.6
199,644 - 13849 mRNA_5481 0.23 -2.4
199,684 - 13849 mRNA_5481 0.26 -1.4
199,812 + 13849 mRNA_5481 0.36 -0.8