Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5479

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194806 to 195878 13847

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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193,945 - 13846 mRNA_5478 0.70 -3.8
194,019 + 13846 mRNA_5478 0.75 -0.5
194,111 + 13846 mRNA_5478 0.81 -1.0
194,225 + 13846 mRNA_5478 0.88 0.1
194,534 - -1.1
194,717 - -1.2
194,883 - -2.2
194,977 + 13847 mRNA_5479 0.16 -0.5
195,751 - 13847 mRNA_5479 0.88 -1.8
195,993 + -2.0
196,121 + -1.8
196,170 + 0.1
196,170 + -1.0
196,283 - -0.5
196,310 + -1.0
196,311 - -2.3
196,321 + -0.3
196,466 + -2.0
196,471 + -2.0
196,486 + -1.3