Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5477

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183800 to 188314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188584 to 192714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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188,366 + -1.7
188,373 + -2.7
188,390 - -0.6
188,512 - -3.1
188,521 + -0.3
188,794 - 0.8
189,613 - 13845 mRNA_5477 0.25 -2.3
190,270 - 13845 mRNA_5477 0.41 0.1
192,339 + -2.5
192,752 - -3.0
192,792 - -2.9
192,795 - -2.0
192,796 + -1.8
192,800 + -2.0
192,816 - -2.8
192,822 + 0.5
192,823 + -1.6
192,957 - 0.0
192,962 + -1.6