Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5433

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5432: 13800 - Hypothetical Protein, at 86010 to 86874 13800 mRNA_5433: 13801 - BLAST UPF0658 Golgi apparatus membrane protein [Termitomyce..., at 87517 to 89164 13801 mRNA_5434: 13802 - KOG2852 Possible oxidoreductase, at 89359 to 90914 13802

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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86,546 + 13800 mRNA_5432 0.62 -1.7
86,668 - 13800 mRNA_5432 0.76 -1.5
86,675 - 13800 mRNA_5432 0.77 -0.7
86,675 + 13800 mRNA_5432 0.77 -0.3
86,776 + 13800 mRNA_5432 0.89 -0.3
86,832 + -0.5
87,750 + 13801 mRNA_5433 0.14 -1.3
87,833 - 13801 mRNA_5433 0.19 -2.2
87,861 + 13801 mRNA_5433 0.21 -1.0
87,871 + 13801 mRNA_5433 0.21 -2.8
87,878 + 13801 mRNA_5433 0.22 -1.5
87,880 - 13801 mRNA_5433 0.22 -0.7
87,882 + 13801 mRNA_5433 0.22 -0.2
87,895 - 13801 mRNA_5433 0.23 -1.7
88,006 - 13801 mRNA_5433 0.30 -1.1
88,033 - 13801 mRNA_5433 0.31 -0.2
88,051 + 13801 mRNA_5433 0.32 -0.4
88,146 + 13801 mRNA_5433 0.38 -1.9
88,158 - 13801 mRNA_5433 0.39 1.3
88,169 - 13801 mRNA_5433 0.40 0.8
88,170 + 13801 mRNA_5433 0.40 -0.4
88,170 - 13801 mRNA_5433 0.40 1.5
88,321 - 13801 mRNA_5433 0.49 -3.0
88,454 + 13801 mRNA_5433 0.57 -1.0
88,462 + 13801 mRNA_5433 0.57 -1.8
88,622 + 13801 mRNA_5433 0.67 -1.5
88,760 - 13801 mRNA_5433 0.75 -0.7
88,782 - 13801 mRNA_5433 0.77 -1.9
88,851 + 13801 mRNA_5433 0.81 -1.4
88,884 - 13801 mRNA_5433 0.83 -3.0
88,963 - 13801 mRNA_5433 0.88 -0.7
89,190 + 0.5
89,469 + -0.2
89,620 + 13802 mRNA_5434 0.17 -1.2
89,761 + 13802 mRNA_5434 0.26 -1.7
89,768 + 13802 mRNA_5434 0.26 -3.6
89,906 - 13802 mRNA_5434 0.35 0.2