Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5431

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5430: 13798 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 82627 to 84263 13798 mRNA_5431: 13799 - KOG1296 Uncharacterized conserved protein, at 84428 to 85305 13799 mRNA_5432: 13800 - Hypothetical Protein, at 86010 to 86874 13800

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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83,433 - 13798 mRNA_5430 0.49 -1.7
83,441 - 13798 mRNA_5430 0.50 -2.2
83,598 - 13798 mRNA_5430 0.59 -2.7
84,171 - -4.1
84,300 - -1.8
84,305 + 1.2
84,459 - -1.6
84,932 - 13799 mRNA_5431 0.57 -0.6
84,970 + 13799 mRNA_5431 0.62 -1.3
85,068 - 13799 mRNA_5431 0.73 -0.4
85,069 - 13799 mRNA_5431 0.73 -0.5
85,154 + 13799 mRNA_5431 0.83 -0.6
85,188 - 13799 mRNA_5431 0.87 -2.7
85,331 - -2.2
85,368 - 0.1
85,406 - -3.4
85,508 - -1.3
85,627 + -2.8
85,657 + -0.0
85,973 + -1.2
85,976 - -0.5
86,026 + -0.7
86,091 + -1.7