Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5427

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5426: 13794 - K06944 K06944 uncharacterized protein, at 72728 to 74932 13794 mRNA_5427: 13795 - Hypothetical Protein, at 75255 to 76663 13795 mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77473 to 79440 13796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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74,262 + 13794 mRNA_5426 0.70 -1.0
74,382 - 13794 mRNA_5426 0.75 -3.2
74,603 + 13794 mRNA_5426 0.85 -0.9
74,712 + 0.6
74,846 - -0.2
75,033 - -2.7
75,121 - -3.9
75,124 - -0.8
75,220 - -0.1
75,299 - -1.8
75,345 - -0.0
75,358 - -2.1
75,408 - 13795 mRNA_5427 0.11 -0.9
75,436 - 13795 mRNA_5427 0.13 -1.9
75,568 + 13795 mRNA_5427 0.22 -1.9
75,571 - 13795 mRNA_5427 0.22 -1.8
75,573 - 13795 mRNA_5427 0.23 -1.8
75,666 - 13795 mRNA_5427 0.29 -2.4
75,762 - 13795 mRNA_5427 0.36 -0.6
75,805 - 13795 mRNA_5427 0.39 -0.4
76,161 + 13795 mRNA_5427 0.64 -1.7
76,165 - 13795 mRNA_5427 0.65 -1.6
76,227 - 13795 mRNA_5427 0.69 -2.0
76,446 - 13795 mRNA_5427 0.85 -2.3
76,464 - 13795 mRNA_5427 0.86 -0.8
76,472 - 13795 mRNA_5427 0.86 -2.8
76,578 - -1.2
76,596 + -1.5
76,811 + -1.5
76,868 + -1.3
77,130 + -0.8
77,150 + -1.7
77,154 + -2.4
77,162 + -1.7
77,299 - -2.3
77,313 + -0.8
77,316 - -1.7
77,321 - -1.5
77,343 + -0.5
77,454 - -0.1
77,483 + -3.1
77,512 + -0.9