Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5369

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555613 to 556991 13736 mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557510 to 559067 13737 mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559592 to 565388 13738

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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556,733 - 13736 mRNA_5368 0.81 -1.2
556,859 + 0.2
556,864 + -1.0
556,867 + -0.8
556,963 - 0.6
557,004 + -1.7
557,020 + -1.2
557,140 + -1.0
557,141 - -0.7
557,149 + -0.5
557,272 - -2.0
557,274 + 0.7
557,275 - -1.2
557,276 - 0.2
557,276 - -2.2
557,283 + -0.3
557,288 + -1.3
557,291 - -0.0
557,291 + -0.8
557,293 + -2.1
557,303 - -2.1
557,311 + -1.4
558,692 - 13737 mRNA_5369 0.76 -0.1
558,850 - 13737 mRNA_5369 0.86 -0.3
558,855 - 13737 mRNA_5369 0.86 -1.1
558,917 + -0.9
559,330 - -2.3