Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5363

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5362: 13730 - Hypothetical Protein, at 543125 to 544034 13730 mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544330 to 546394 13731 mRNA_5364: 13732 - KOG1630 Growth hormone-induced protein and related proteins, at 546685 to 547952 13732

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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543,418 - 13730 mRNA_5362 0.32 -2.5
543,625 - 13730 mRNA_5362 0.55 -1.1
543,783 - 13730 mRNA_5362 0.72 -3.3
543,816 + 13730 mRNA_5362 0.76 -0.4
543,931 + 13730 mRNA_5362 0.89 -2.3
543,931 + 13730 mRNA_5362 0.89 -2.4
543,951 - 0.0
543,959 - 0.1
543,959 + -0.6
543,970 - -3.1
544,005 - -1.3
544,007 - -1.7
544,029 - -1.0
544,035 + -1.0
544,084 - -4.0
544,109 + -2.6
544,418 - 0.6
544,761 + 13731 mRNA_5363 0.21 -2.3
546,375 + -1.6
546,402 + -0.7
546,652 - -2.2
546,710 + -2.6
546,860 + 13732 mRNA_5364 0.14 -2.5
546,914 + 13732 mRNA_5364 0.18 -1.2
547,123 + 13732 mRNA_5364 0.35 -1.1
547,238 - 13732 mRNA_5364 0.44 0.1
547,267 + 13732 mRNA_5364 0.46 0.9
547,267 + 13732 mRNA_5364 0.46 -0.7
547,270 - 13732 mRNA_5364 0.46 -0.7