Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5354

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5354: 13722 - KOG0557 Dihydrolipoamide acetyltransferase, at 527210 to 528729 13722 mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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526,243 + -1.1
526,251 - -0.8
526,285 - -2.3
526,439 + -0.6
526,973 - -1.8
526,978 - -0.1
527,080 - -3.1
527,122 - -3.7
527,125 + -0.9
527,128 - -2.0
527,143 + -1.3
527,159 - -0.6
527,429 + 13722 mRNA_5354 0.14 -0.2
528,000 + 13722 mRNA_5354 0.52 -0.9
528,752 + 0.2
528,869 + -2.2
529,164 - 13723 mRNA_5355 0.12 -1.2
529,225 + 13723 mRNA_5355 0.16 -1.2
529,473 - 13723 mRNA_5355 0.32 -0.7
529,633 - 13723 mRNA_5355 0.42 0.4