Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5301

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391828 to 394452 13668 mRNA_5301: 13669 - K13950 pabAB para-aminobenzoate synthetase, at 394643 to 397418 13669 mRNA_5302: 13670 - K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR, at 397977 to 403896 13670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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394,615 - -1.0
394,677 - -0.6
394,683 + -2.9
394,684 - 1.4
394,835 - 0.6
395,147 - 13669 mRNA_5301 0.18 -0.3
395,158 - 13669 mRNA_5301 0.19 -0.4
395,171 + 13669 mRNA_5301 0.19 -2.5
395,293 + 13669 mRNA_5301 0.23 -0.3
395,524 - 13669 mRNA_5301 0.32 -0.5
395,779 + 13669 mRNA_5301 0.41 0.2
395,876 - 13669 mRNA_5301 0.44 -0.7
396,025 - 13669 mRNA_5301 0.50 -3.1
396,066 + 13669 mRNA_5301 0.51 -2.0
396,429 - 13669 mRNA_5301 0.64 -1.8
396,483 + 13669 mRNA_5301 0.66 -2.2
396,509 + 13669 mRNA_5301 0.67 -2.6
396,625 - 13669 mRNA_5301 0.71 -2.0
396,643 + 13669 mRNA_5301 0.72 -2.4
396,742 + 13669 mRNA_5301 0.76 -1.5
396,765 - 13669 mRNA_5301 0.76 -3.2
396,956 - 13669 mRNA_5301 0.83 -2.9
397,060 - 13669 mRNA_5301 0.87 0.4
397,161 + 1.4
397,207 - -0.8
397,376 - 1.3
397,498 + -0.5
397,526 + -2.1
397,809 - -2.2
397,818 + -0.5
398,115 + -2.2
398,287 + -0.9
398,287 + 0.8
398,389 - -1.9
398,390 + -0.4