Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5299

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386412 to 388025 13666 mRNA_5299: 13667 - BLAST RNA polymerase sigma factor, sigma-70 family [Rho..., at 388361 to 391277 13667 mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391828 to 394452 13668

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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387,997 + -3.1
388,120 - -0.0
388,124 - -1.7
388,270 + -1.6
388,273 + -0.9
388,273 + 0.2
388,276 + -1.7
388,281 + -1.9
388,286 - -2.5
388,286 + -0.8
388,374 - -0.0
388,400 + -0.5
388,417 - 0.2
388,434 + -2.7
388,444 + -0.9
388,462 + -0.2
388,479 - 0.3
388,719 - 13667 mRNA_5299 0.12 -1.9
388,869 + 13667 mRNA_5299 0.17 -1.8
389,089 + 13667 mRNA_5299 0.25 0.2
389,141 + 13667 mRNA_5299 0.27 -0.6
389,331 + 13667 mRNA_5299 0.33 -0.5
389,498 + 13667 mRNA_5299 0.39 -0.6
389,499 + 13667 mRNA_5299 0.39 0.1
391,267 + -0.4
391,475 - -3.5
391,491 - -0.3
391,786 + -2.3