Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5296

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663 mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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381,627 + 13663 mRNA_5295 0.63 -0.5
381,637 + 13663 mRNA_5295 0.64 -2.8
381,659 + 13663 mRNA_5295 0.67 -0.3
381,661 - 13663 mRNA_5295 0.67 -0.7
381,781 + 13663 mRNA_5295 0.81 -3.1
381,782 - 13663 mRNA_5295 0.81 -1.2
381,796 - 13663 mRNA_5295 0.82 0.1
381,809 + 13663 mRNA_5295 0.84 -2.0
381,812 - 13663 mRNA_5295 0.84 -1.4
381,813 - 13663 mRNA_5295 0.84 0.6
381,820 - 13663 mRNA_5295 0.85 -2.7
381,880 - -2.2
381,933 - -2.1
381,944 - -2.5
381,955 - 0.1
381,956 + -0.6
381,967 - -3.1
382,042 - -2.3
382,093 + -3.4
382,097 + -0.0
382,103 + -0.5
382,106 + -2.6
382,114 + -1.5
382,205 - -0.0
382,232 + -2.5
382,255 - -0.9
382,276 - -2.6
382,281 + 0.3
382,353 - -1.1
382,354 + -1.4
382,379 + -0.6
382,386 + -0.4
382,561 + 13664 mRNA_5296 0.31 -0.7
382,614 + 13664 mRNA_5296 0.44 -1.0
382,638 - 13664 mRNA_5296 0.49 -0.7
382,656 + 13664 mRNA_5296 0.54 -2.1
382,747 + 13664 mRNA_5296 0.76 -0.1
382,809 - 0.6
382,812 - 1.1
382,813 + -1.6
382,814 - -0.5
382,823 - -1.5
382,823 - 1.2
382,824 - -1.3
382,848 - -1.2
382,864 - -1.9
382,869 + -3.1
382,874 - -0.6
382,879 + -1.2
382,882 - -0.5
382,883 + -0.5
382,885 - 1.1
382,907 - -1.8
382,911 + -3.8
382,912 - -0.8
382,921 + -0.8
382,961 - -0.4
382,973 - -3.2
383,002 + -0.8
383,003 - -1.3
383,033 - -2.6
383,047 - 0.0
383,051 - 0.8
383,066 + -0.7
383,067 + -1.0
383,074 - -2.3
383,085 - -3.1
383,097 - -2.3
383,099 - -4.5
383,114 - -1.8
383,134 + -2.2
383,138 + 1.8
383,146 - -1.5
383,156 + -1.4
383,162 - -2.2
383,163 - -3.7
383,164 + -0.6
383,165 - 0.0
383,195 - -0.9
383,198 + -2.0
383,204 - -2.6
383,212 - 2.1
383,223 - -2.0
383,266 + 13665 mRNA_5297 0.12 -1.8
383,276 - 13665 mRNA_5297 0.13 -0.5
383,370 - 13665 mRNA_5297 0.23 -1.2
383,377 - 13665 mRNA_5297 0.24 -1.5
383,384 + 13665 mRNA_5297 0.25 0.5
383,416 - 13665 mRNA_5297 0.28 -1.8
383,417 + 13665 mRNA_5297 0.28 -0.6
383,423 + 13665 mRNA_5297 0.29 -2.7
383,430 + 13665 mRNA_5297 0.30 -0.8
383,535 + 13665 mRNA_5297 0.41 -1.8
383,543 - 13665 mRNA_5297 0.42 -1.7
383,707 + 13665 mRNA_5297 0.59 -0.8
383,728 + 13665 mRNA_5297 0.61 1.0
383,745 + 13665 mRNA_5297 0.63 -1.6