Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5285

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5284: 13652 - Hypothetical Protein, at 356424 to 357463 13652 mRNA_5285: 13653 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 358182 to 359480 13653 mRNA_5286: 13654 - Hypothetical Protein, at 359767 to 360966 13654

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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357,524 - -3.6
357,527 + -0.8
357,573 - -0.8
357,681 - -2.4
357,692 + -0.2
357,830 - -1.4
357,844 + -0.7
357,976 + -1.5
358,113 + -1.9
358,130 - -0.3
358,243 - -2.9
358,270 - 3.4
358,318 + 13653 mRNA_5285 0.10 -1.7
358,442 + 13653 mRNA_5285 0.20 -0.1
358,696 - 13653 mRNA_5285 0.40 -0.5
359,136 - 13653 mRNA_5285 0.73 -3.1
359,152 - 13653 mRNA_5285 0.75 -0.8
359,269 + 13653 mRNA_5285 0.84 -2.2
359,271 - 13653 mRNA_5285 0.84 -1.7
359,440 - -0.1
359,452 + 0.3
359,583 - -1.8
359,724 - -1.0
359,780 - -1.0
359,844 + 0.8
359,995 + 13654 mRNA_5286 0.19 -2.6
360,125 - 13654 mRNA_5286 0.30 -1.1
360,369 + 13654 mRNA_5286 0.50 -2.8