Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5240

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5239: 13607 - K10859 ALKBH2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, at 236624 to 237646 13607 mRNA_5240: 13608 - HMMPfam-Ubiquinol-cytochrome-c reductase complex subunit (QCR10)-PF09796, at 238020 to 238702 13608 mRNA_5241: 13609 - K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F, at 238987 to 242229 13609

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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237,342 + 13607 mRNA_5239 0.70 -0.7
237,776 - -1.3
237,785 - -0.1
237,799 - -1.8
237,907 + 0.1
238,003 + -2.8
238,018 - -1.5
238,068 - -2.5
238,073 - 0.7
238,221 + 13608 mRNA_5240 0.29 -1.2
238,228 - 13608 mRNA_5240 0.30 -2.0
238,509 - 13608 mRNA_5240 0.72 -1.5
238,527 + 13608 mRNA_5240 0.74 -2.6
238,664 - -1.6
238,668 - -2.4
238,817 - 1.3
238,953 + -1.0
238,967 + -2.6
239,076 - 1.0
239,271 + -0.7
239,603 - 13609 mRNA_5241 0.19 0.4
239,679 + 13609 mRNA_5241 0.21 -2.5