Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5214

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5213: 13581 - Hypothetical Protein, at 163193 to 164200 13581 mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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163,453 - 13581 mRNA_5213 0.26 -2.3
163,668 + 13581 mRNA_5213 0.47 -1.1
163,734 + 13581 mRNA_5213 0.54 -2.7
163,948 + 13581 mRNA_5213 0.75 -1.0
163,995 + 13581 mRNA_5213 0.80 -2.7
164,058 + 13581 mRNA_5213 0.86 -2.0
164,492 - -2.0
164,788 + 13582 mRNA_5214 0.19 -0.5
164,857 - 13582 mRNA_5214 0.22 -1.8
164,941 - 13582 mRNA_5214 0.26 -0.8
164,967 - 13582 mRNA_5214 0.28 -0.8
164,995 + 13582 mRNA_5214 0.29 -2.2
165,243 - 13582 mRNA_5214 0.41 0.1
165,701 - 13582 mRNA_5214 0.63 -2.0
165,858 + 13582 mRNA_5214 0.71 -1.2
165,948 + 13582 mRNA_5214 0.75 -3.3
166,072 + 13582 mRNA_5214 0.81 1.2
166,118 - 13582 mRNA_5214 0.83 -2.1
166,235 + 13582 mRNA_5214 0.89 -4.8
166,253 - 13582 mRNA_5214 0.90 -1.5
166,276 - 0.5
166,355 + -2.1
166,394 + -0.2
166,407 + -0.7
166,408 + 0.2
166,755 + 13583 mRNA_5215 0.17 -0.2
167,243 + 13583 mRNA_5215 0.77 -1.0