Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5204

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5203: 13571 - K06709 KDM4, JMJD2, JHDM3 jumonji domain-containing protein 2, at 141412 to 145870 13571 mRNA_5204: 13572 - Hypothetical Protein, at 146272 to 147091 13572

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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145,322 - 13571 mRNA_5203 0.88 -1.9
145,382 - 13571 mRNA_5203 0.89 -2.5
145,437 + -1.1
145,438 - -0.8
145,444 - -2.2
145,468 - -1.5
145,477 + -0.2
145,499 - 0.0
145,499 - -1.4
145,506 + -1.1
145,520 + -1.4
145,597 + -0.7
145,602 - -0.3
145,627 + -0.1
145,637 + -2.2
145,728 - -0.8
145,739 - 1.9
145,744 - -0.2
145,753 + -0.3
145,765 - -1.7
145,779 + -3.1
145,924 - -3.5
145,924 + 0.1
145,926 - -1.8
145,935 + -0.1
145,938 - 0.5
146,057 + -0.1
146,060 - -1.3
146,075 - 0.0
146,106 + -0.9
146,273 - 1.5
146,850 - 13572 mRNA_5204 0.70 0.0
147,662 + -1.7
147,890 - -0.2