Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5191

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5190: 13558 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 114138 to 116063 13558 mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116613 to 117622 13559 mRNA_5192: 13560 - KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family), at 117744 to 118664 13560

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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116,050 + -2.3
116,371 - -3.3
116,378 - -1.4
116,531 - -0.5
116,673 - -2.7
116,814 + 13559 mRNA_5191 0.20 -1.5
116,933 - 13559 mRNA_5191 0.32 -0.7
116,985 - 13559 mRNA_5191 0.37 -2.1
117,106 + 13559 mRNA_5191 0.49 -0.8
117,132 - 13559 mRNA_5191 0.51 -1.3
117,279 + 13559 mRNA_5191 0.66 -0.1
117,688 - 0.1
117,707 - -3.1
117,709 - -1.1
117,858 - 13560 mRNA_5192 0.12 1.1
117,859 + 13560 mRNA_5192 0.12 1.3
118,165 + 13560 mRNA_5192 0.46 -0.6
118,169 + 13560 mRNA_5192 0.46 -1.5