Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5166

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658 13533 mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534 mRNA_5167: 13535 - Hypothetical Protein, at 58782 to 59470 13535

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
52,359 + -2.3
52,371 - 13533 mRNA_5165 0.14 -1.5
52,372 + 13533 mRNA_5165 0.14 -1.6
52,438 + 13533 mRNA_5165 0.34 -0.8
52,453 + 13533 mRNA_5165 0.38 0.1
52,460 - 13533 mRNA_5165 0.40 1.1
52,486 - 13533 mRNA_5165 0.48 -3.9
52,507 - 13533 mRNA_5165 0.54 -0.4
52,510 - 13533 mRNA_5165 0.55 0.1
52,510 - 13533 mRNA_5165 0.55 0.1
52,517 + 13533 mRNA_5165 0.57 -1.2
52,520 + 13533 mRNA_5165 0.58 -1.8
52,522 + 13533 mRNA_5165 0.59 -0.9
52,523 + 13533 mRNA_5165 0.59 -2.6
52,524 - 13533 mRNA_5165 0.59 -1.1
52,528 + 13533 mRNA_5165 0.61 -1.9
52,530 - 13533 mRNA_5165 0.61 0.3
52,536 + 13533 mRNA_5165 0.63 -1.3
52,536 - 13533 mRNA_5165 0.63 0.6
52,538 - 13533 mRNA_5165 0.64 -0.5
52,542 + 13533 mRNA_5165 0.65 -1.2
52,543 + 13533 mRNA_5165 0.65 -2.0
52,560 + 13533 mRNA_5165 0.70 -0.4
52,560 + 13533 mRNA_5165 0.70 -1.8
52,561 + 13533 mRNA_5165 0.71 -0.8
52,567 - 13533 mRNA_5165 0.72 -1.3
52,574 - 13533 mRNA_5165 0.74 -1.9
52,577 + 13533 mRNA_5165 0.75 -2.4
52,581 - 13533 mRNA_5165 0.77 -1.9
52,582 + 13533 mRNA_5165 0.77 -0.6
52,583 - 13533 mRNA_5165 0.77 -1.5
52,584 + 13533 mRNA_5165 0.77 -3.5
52,586 + 13533 mRNA_5165 0.78 -2.4
52,596 - 13533 mRNA_5165 0.81 -2.5
52,603 - 13533 mRNA_5165 0.83 -1.8
52,648 - -1.6
52,814 + -2.6
52,957 - -1.9
53,154 + -2.5
53,936 + 13534 mRNA_5166 0.13 -0.8
54,087 + 13534 mRNA_5166 0.16 0.3
54,171 + 13534 mRNA_5166 0.18 -0.8
54,289 - 13534 mRNA_5166 0.20 -0.3
54,615 - 13534 mRNA_5166 0.27 -2.6
54,694 - 13534 mRNA_5166 0.28 0.1
54,703 + 13534 mRNA_5166 0.28 -0.7
55,015 + 13534 mRNA_5166 0.35 -0.9
55,358 - 13534 mRNA_5166 0.42 -3.2
55,381 + 13534 mRNA_5166 0.42 1.0
55,454 - 13534 mRNA_5166 0.44 -1.5
55,488 - 13534 mRNA_5166 0.44 -2.0
55,551 - 13534 mRNA_5166 0.46 -3.3
55,610 - 13534 mRNA_5166 0.47 -1.3
55,699 + 13534 mRNA_5166 0.49 -1.4
55,755 - 13534 mRNA_5166 0.50 -0.7
55,818 - 13534 mRNA_5166 0.51 -2.0
56,002 - 13534 mRNA_5166 0.55 -1.5
56,206 + 13534 mRNA_5166 0.59 -1.1
56,276 + 13534 mRNA_5166 0.60 -2.2
56,329 + 13534 mRNA_5166 0.61 -1.8
56,522 + 13534 mRNA_5166 0.65 -2.5
56,566 - 13534 mRNA_5166 0.66 -2.5
57,009 + 13534 mRNA_5166 0.75 0.1
57,441 - 13534 mRNA_5166 0.84 -1.8
57,607 + 13534 mRNA_5166 0.88 -0.4
57,706 + 13534 mRNA_5166 0.90 -1.7
57,707 - 13534 mRNA_5166 0.90 -0.6
57,858 - -1.1
57,867 + -2.6
57,896 + -2.1
58,295 - -3.4
58,464 + -1.1
58,586 - -1.2
58,589 - -0.8
58,613 - -0.4
58,633 - -0.2
58,734 + -1.3
59,032 - 13535 mRNA_5167 0.36 -1.7
59,174 + 13535 mRNA_5167 0.57 -0.8
59,187 + 13535 mRNA_5167 0.59 -0.5
59,189 + 13535 mRNA_5167 0.59 -0.8