Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5159

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39677 to 40567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41390 to 42543 13527 mRNA_5160: 13528 - Hypothetical Protein, at 43089 to 43847 13528

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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40,687 + 1.8
40,796 - -1.0
40,805 + -1.7
40,938 - -2.3
41,120 + -0.1
41,121 + 1.2
41,147 + -2.6
41,193 + -1.7
41,390 - 0.8
41,408 + 0.4
41,717 + 13527 mRNA_5159 0.28 -2.8
41,812 + 13527 mRNA_5159 0.37 -1.5
41,814 - 13527 mRNA_5159 0.37 -0.7
41,975 + 13527 mRNA_5159 0.51 -1.4
42,119 + 13527 mRNA_5159 0.63 -2.8
42,256 + 13527 mRNA_5159 0.75 -1.9
42,275 + 13527 mRNA_5159 0.77 -1.6
42,286 + 13527 mRNA_5159 0.78 0.4
42,296 + 13527 mRNA_5159 0.79 -3.2
42,320 - 13527 mRNA_5159 0.81 -0.2
42,555 + -3.0
42,721 - -2.7
43,332 - 13528 mRNA_5160 0.32 -1.4
43,503 - 13528 mRNA_5160 0.55 -0.9