Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5144

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5143: 13511 - K12763 SOK2 protein SOK2, at 4212 to 7292 13511 mRNA_5144: 13512 - BLAST putative mit domain-containing protein [Erysiphe neca..., at 8147 to 8373 13512 mRNA_5145: 13513 - Hypothetical Protein, at 8823 to 11115 13513

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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7,151 - -0.1
7,151 - -1.8
7,151 - -0.2
7,152 + -2.1
7,157 + -0.7
7,157 + -1.6
7,157 + -0.0
7,404 - -1.6
7,405 - -2.1
7,410 + -2.0
7,547 - -0.8
7,889 - -1.6
8,019 - -1.5
8,069 + -2.4
8,108 + -1.9
8,267 - 13512 mRNA_5144 0.53 -1.4
8,396 + -0.3
8,651 + -2.4
8,952 - -3.4
9,234 + 13513 mRNA_5145 0.18 -3.2