Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5142

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5141: 13509 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1 to 752 13509 mRNA_5142: 13510 - K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10, at 1705 to 3095 13510

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,004 + -4.9
1,164 + -1.6
1,286 - -0.2
1,299 + -2.9
1,302 - -0.8
1,556 - -1.6
1,774 - -3.7
1,781 + -1.8
1,884 + 13510 mRNA_5142 0.13 -3.6
2,003 - 13510 mRNA_5142 0.21 -3.1
2,160 - 13510 mRNA_5142 0.33 0.2
2,367 + 13510 mRNA_5142 0.48 -2.5
2,439 - 13510 mRNA_5142 0.53 -2.0
2,786 + 13510 mRNA_5142 0.78 0.7
2,895 + 13510 mRNA_5142 0.86 -1.3
3,162 - -0.8
3,478 + -1.1
3,502 + -0.8
3,509 + -1.3
3,622 + -1.3
3,622 + -0.2
3,628 + -0.8
3,641 + -1.0
3,726 - -3.9
3,741 + 0.8
3,765 + -4.2
3,803 + -0.9
4,034 + -1.2