Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5115

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5114: 13482 - K14820 BRX1, BRIX1 ribosome biogenesis protein BRX1, at 1792660 to 1793898 13482 mRNA_5115: 13483 - Hypothetical Protein, at 1794132 to 1795760 13483 mRNA_5116: 13484 - K00721 DPM1 dolichol-phosphate mannosyltransferase, at 1796200 to 1797488 13484

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,793,849 - -1.7
1,794,356 - 13483 mRNA_5115 0.14 -1.1
1,794,474 + 13483 mRNA_5115 0.21 0.4
1,794,737 - 13483 mRNA_5115 0.37 -1.8
1,794,936 - 13483 mRNA_5115 0.49 -0.5
1,795,048 - 13483 mRNA_5115 0.56 -0.1
1,795,063 + 13483 mRNA_5115 0.57 -2.8
1,795,064 - 13483 mRNA_5115 0.57 -0.0
1,795,090 - 13483 mRNA_5115 0.59 0.4
1,795,353 - 13483 mRNA_5115 0.75 -1.9
1,795,525 + 13483 mRNA_5115 0.86 -0.4
1,795,531 + 13483 mRNA_5115 0.86 -2.7
1,795,963 + 0.2
1,795,972 - -1.6
1,796,091 - -0.9
1,796,095 - 0.2
1,796,101 - -1.9
1,796,102 + -2.8
1,796,108 - -1.8
1,796,115 + -1.2
1,796,118 + 1.4
1,796,119 + -2.2
1,796,185 + -0.8